C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: papillary renal cell carcinoma (translocation-associated)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469071 PRCC-002 ENSG00000143294 9606 + 1:156795812-156800812 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLungMuscleOvaryENST00000469071
Transcript ID Breast Colon Heart Lung Muscle Ovary
ENST00000469071 0.598±0.00 0.851±0.00 0.305±0.00 0.474±0.00 0.791±0.00 0.958±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JO CIL_0008JO_0001 VISTA 1:156202708-156805613
CIL_000850 CIL_000850_0001 VISTA 1:156360457-156965492

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005015 Prcc-001 protein_coding Mus_musculus 0 455

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