C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469308 EIF1-005 ENSG00000173812 9606 + 17:41688935-41690999 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000469308
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000469308 219.585±0.00 166.884±0.00 153.933±0.00 225.071±0.00 170.674±0.00 81.586±71.54 125.938±0.00 192.037±0.00 146.678±127.51 525.039±563.42 169.066±81.30 237.368±54.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TT CIL_0000TT_0002 CGP 17:41619437-41692668
CIL_0007BG CIL_0007BG_0001 CGP 17:41688885-41715969

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049385 Eif1-001 protein_coding Mus_musculus 0 832
ENSMUST00000088313 Emd-002 protein_coding Mus_musculus 0 780
ENSMUST00000132618 Eif1-005 processed_transcript Mus_musculus 0 534
ENSMUST00000139846 Eif1-003 processed_transcript Mus_musculus 0 510
ENSMUST00000139408 Gm10157-001 processed_pseudogene Mus_musculus 0 507
ENSMUST00000178971 Gm6900-001 processed_pseudogene Mus_musculus 0 507
ENSMUST00000179168 Gm16378-001 processed_pseudogene Mus_musculus 0 496
ENSMUST00000119926 Gm14686-001 transcribed_processed_pseudogene Mus_musculus 0 486
ENSMUST00000173735 Gm6155-001 processed_pseudogene Mus_musculus 0 479
ENSMUST00000072732 Gm5471-201 processed_pseudogene Mus_musculus 0 477
ENSMUST00000076828 Gm5265-201 processed_pseudogene Mus_musculus 0 473
ENSMUST00000161062 Gm6428-001 processed_pseudogene Mus_musculus 0 459
ENSMUST00000086606 Eif1-ps1-201 processed_pseudogene Mus_musculus 0 457
ENSMUST00000121450 Eif1-ps3-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000084813 RP24-208N6.2-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000100019 Gm6913-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000152521 Eif1-004 protein_coding Mus_musculus 0 379
ENSMUST00000159003 Gm16125-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000151513 Eif1-002 protein_coding Mus_musculus 0 363
ENSDART00000009132 eif1b-201 protein_coding Danio_rerio 0.0000000005 69
ENSDART00000151383 eif1b-003 retained_intron Danio_rerio 0.0000000005 69
ENSDART00000151582 eif1b-002 retained_intron Danio_rerio 0.0000000005 69
ENSDART00000132874 eif1b-001 protein_coding Danio_rerio 0.0000000005 69

Loading