C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L35a pseudogene 32
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469688 RPL35AP32-001 ENSG00000243404 9606 - 15:66446455-66446777 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryTestisENST00000469688
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Testis
ENST00000469688 0.363±0.00 1.021±0.00 0.286±0.00 0.369±0.00 0.348±0.00 0.295±0.25 0.231±0.00 0.086±0.00 1.071±0.00 0.304±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Q7 CIL_0008Q7_0001 VISTA 15:66378983-66980203

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117444 Rpl35a-ps2-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000121779 Rpl35a-ps4-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000147311 Rpl35a-ps3-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000148282 Rpl35a-ps6-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000117571 Gm10243-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000089635 Gm10029-201 processed_pseudogene Mus_musculus 0 331
ENSMUST00000090395 Gm10247-201 processed_pseudogene Mus_musculus 0 331
ENSMUST00000115075 Rpl35a-006 protein_coding Mus_musculus 0 331
ENSMUST00000115076 Rpl35a-005 protein_coding Mus_musculus 0 331
ENSMUST00000115078 Rpl35a-002 protein_coding Mus_musculus 0 331
ENSMUST00000115079 Rpl35a-004 protein_coding Mus_musculus 0 331
ENSMUST00000078804 Rpl35a-001 protein_coding Mus_musculus 0 331
ENSMUST00000137013 Rpl35a-ps5-001 processed_pseudogene Mus_musculus 0 326
ENSMUST00000117142 Gm14279-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000120385 Gm16200-001 processed_pseudogene Mus_musculus 0 307
ENSMUST00000122341 Gm12778-001 processed_pseudogene Mus_musculus 0 302
ENSMUST00000080603 Rpl35a-ps7-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000121333 Gm2214-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000161714 Gm16134-001 processed_pseudogene Mus_musculus 0 272
ENSMUST00000077495 Gm16335-001 processed_pseudogene Mus_musculus 0 231
ENSMUST00000121176 Gm16021-001 processed_pseudogene Mus_musculus 0 226
ENSMUST00000133785 Rpl35a-003 retained_intron Mus_musculus 4.99997e-41 171
ENSMUST00000137720 Rpl35a-007 retained_intron Mus_musculus 2e-39 165
ENSMUST00000120264 Gm15481-001 processed_pseudogene Mus_musculus 3e-28 128
ENSMUST00000177148 Tctn1-005 retained_intron Mus_musculus 3e-28 128
ENSMUST00000121023 Gm13940-001 processed_pseudogene Mus_musculus 0.000000000004 75

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