C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LCK proto-oncogene, Src family tyrosine kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469956 LCK-003 ENSG00000182866 9606 + 1:32275620-32277173 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyMuscleTestisENST00000469956
Transcript ID Adipose Brain Colon Heart Kidney Muscle Testis
ENST00000469956 0.279±0.00 0.278±0.00 0.463±0.00 0.097±0.00 0.694±0.52 0.092±0.00 0.420±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AA CIL_0008AA_0001 VISTA 1:31744429-32345312

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167288 Lck-201 protein_coding Mus_musculus 0 682
ENSMUST00000102596 Lck-001 protein_coding Mus_musculus 0 682
ENSMUST00000067240 Lck-002 protein_coding Mus_musculus 0 682
ENSMUST00000123640 Lck-004 retained_intron Mus_musculus 0 638
ENSMUST00000038014 Dnajc16-001 protein_coding Mus_musculus 0.00000003 64

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