C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly (ADP-ribose) polymerase family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000471971 PARP3-003 ENSG00000041880 9606 + 3:51942371-51948603 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonMuscleENST00000471971
Transcript ID Colon Muscle
ENST00000471971 0.833±0.39 0.413±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087C CIL_00087C_0001 VISTA 3:51705330-52307529
CIL_0008NT CIL_0008NT_0001 VISTA 3:51738719-52342071

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067218 Parp3-001 protein_coding Mus_musculus 0 1341
ENSMUST00000123555 Parp3-004 protein_coding Mus_musculus 0 1336
ENSMUST00000112479 Parp3-002 protein_coding Mus_musculus 0 1304
ENSMUST00000145396 Parp3-005 retained_intron Mus_musculus 0 575
ENSMUST00000139362 Parp3-008 retained_intron Mus_musculus 0 294

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