C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: arginine/serine-rich coiled-coil 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000471994 RSRC1-003 ENSG00000174891 9606 + 3:158110068-158460962 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000471994
Transcript ID Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000471994 4.190±0.00 10.903±3.44 6.026±0.00 3.563±0.00 1.501±0.00 10.574±0.00 4.273±0.00 5.187±2.61 9.164±0.00 8.245±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SK CIL_0007SK_0001 VISTA 3:157571437-158172574
CIL_0008TK CIL_0008TK_0001 VISTA 3:157757953-158360211
CIL_00098J CIL_00098J_0001 VISTA 3:157833085-158434392
CIL_0007KJ CIL_0007KJ_0001 UCNEbase 3:157856332-158528467
CIL_0007SC CIL_0007SC_0001 VISTA 3:157864514-158466174
CIL_0008QV CIL_0008QV_0001 VISTA 3:157885521-158486853
CIL_0008BN CIL_0008BN_0001 VISTA 3:157971822-158572677
CIL_00086V CIL_00086V_0001 VISTA 3:157991733-158593047
CIL_0008BM CIL_0008BM_0001 VISTA 3:158007957-158609595
CIL_0008KO CIL_0008KO_0001 VISTA 3:158067861-158669043
CIL_0004JW CIL_0004JW_0002 CGP 3:158095954-158545730

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065074 Rsrc1-002 protein_coding Mus_musculus 0 725
ENSMUST00000161726 Rsrc1-007 protein_coding Mus_musculus 0 660
ENSMUST00000162036 Rsrc1-001 protein_coding Mus_musculus 0 656
ENSMUST00000162693 Rsrc1-006 protein_coding Mus_musculus 0 638
ENSMUST00000046542 Rsrc1-005 protein_coding Mus_musculus 0 342
ENSMUST00000065047 Rsrc1-004 protein_coding Mus_musculus 9.99967e-42 174

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