C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: synaptophysin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000472598 SYP-002 ENSG00000102003 9606 - X:49189137-49200176 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENST00000472598
Transcript ID Liver
ENST00000472598 0.466±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000069520 Syp-001 protein_coding Mus_musculus 0 869
ENSMUST00000149795 Syp-002 retained_intron Mus_musculus 0 267
ENSMUST00000137515 Syp-005 retained_intron Mus_musculus 5e-25 119
ENSMUST00000150572 Syp-004 processed_transcript Mus_musculus 2e-23 113
ENSMUST00000128890 Syp-003 protein_coding Mus_musculus 2e-23 113

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