C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000472789 SMARCD3-014 ENSG00000082014 9606 - 7:151238981-151240208 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0001 VISTA 7:150668461-151272977
CIL_0007RX CIL_0007RX_0001 VISTA 7:151109813-151711422
CIL_0000KE CIL_0000KE_0002 CGP 7:151207837-151238827
CIL_0006DG CIL_0006DG_0002 CGP 7:151232489-151277896
CIL_0004EL CIL_0004EL_0001 CGP 7:151238764-151378449

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088295 Chpf2-201 protein_coding Mus_musculus 0 396
ENSMUST00000030791 Smarcd3-001 protein_coding Mus_musculus 0 342
ENSMUST00000144995 Smarcd3-002 retained_intron Mus_musculus 0 342

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