C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calmodulin binding transcription activator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000473578 CAMTA1-010 ENSG00000171735 9606 + 1:6785480-6872038 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000473578
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000473578 23.172±0.00 16.630±0.00 1.699±0.00 21.257±0.00 15.486±14.03 19.575±14.19 23.750±0.00 7.203±1.90 19.549±0.00 9.973±7.09 31.340±30.66 10.065±3.85 32.083±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019N CIL_00019N_0002 CGP 1:6785324-7781432

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000185034 Camta1-003 processed_transcript Mus_musculus 0 907
ENSMUST00000153938 Camta1-013 nonsense_mediated_decay Mus_musculus 0 643
ENSMUST00000135780 Camta1-004 processed_transcript Mus_musculus 0 621
ENSMUST00000049790 Camta1-001 protein_coding Mus_musculus 0 521
ENSMUST00000097774 Camta1-002 protein_coding Mus_musculus 0 521
ENSMUST00000169423 Camta1-201 protein_coding Mus_musculus 0 427
ENSMUST00000155685 Camta1-005 processed_transcript Mus_musculus 0 222

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