C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB5A, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000473608 RAB5A-010 ENSG00000144566 9606 + 3:19975516-19984121 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLiverLungMuscleENST00000473608
Transcript ID Bladder Brain Colon Kidney Liver Lung Muscle
ENST00000473608 4.968±0.00 10.836±0.00 4.041±0.00 7.653±0.00 5.186±0.00 4.545±0.00 1.750±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VJ CIL_0002VJ_0002 CGP 3:19879472-19985175
CIL_0004HT CIL_0004HT_0001 CGP 3:19947079-20012330

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017975 Rab5a-201 protein_coding Mus_musculus 0 719
ENSMUST00000122122 Gm12045-001 processed_pseudogene Mus_musculus 0 331

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