C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box K2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000473637 FOXK2-002 ENSG00000141568 9606 + 17:82519713-82602392 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000473637
Transcript ID Adipose Adrenal Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000473637 10.345±0.00 6.725±0.00 6.922±0.00 4.453±2.65 7.436±0.00 2.641±1.37 15.310±0.00 6.682±5.31 8.614±5.38 8.582±0.33 20.050±0.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00054L CIL_00054L_0001 CGP 17:82458180-82644662
CIL_000440 CIL_000440_0002 CGP 17:82519713-82648553

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IDA magnesium ion binding
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003700 IEA:NAS sequence-specific DNA binding transcription factor activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA:NAS regulation of transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0043565 IEA:IDA sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106113 Foxk2-001 protein_coding Mus_musculus 0 2047
ENSDART00000018159 FOXK2-001 protein_coding Danio_rerio 5.60519e-45 187
ENSMUST00000153579 Foxk2-002 processed_transcript Mus_musculus 3.99931e-42 178
ENSDART00000149387 foxk2-003 retained_intron Danio_rerio 9.99967e-42 176
ENSDART00000045071 foxk2-001 protein_coding Danio_rerio 9.99967e-42 176
ENSMUST00000072837 Foxk1-201 protein_coding Mus_musculus 1e-31 143

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