Transcript ID | Muscle |
---|---|
ENST00000473869 | 1.554±0.00 |
Transcript Info |
||||||
Description: | TAR DNA binding protein | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000473869 | TARDBP-002 | ENSG00000120948 | 9606 | + | 1:11013716-11025019 | nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_00082Y | CIL_00082Y_0001 | VISTA | 1:10421182-11021687 |
CIL_0008S2 | CIL_0008S2_0001 | VISTA | 1:10435049-11039184 |
CIL_0008RU | CIL_0008RU_0001 | VISTA | 1:10491513-11092116 |
CIL_0008JG | CIL_0008JG_0001 | VISTA | 1:10565145-11165671 |
CIL_0008JY | CIL_0008JY_0001 | VISTA | 1:10605072-11206087 |
CIL_00019T | CIL_00019T_0002 | CGP | 1:10946471-11026420 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0000166 | IEA | nucleotide binding |
GO:0003676 | IEA | nucleic acid binding |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000045180 | Tardbp-002 | nonsense_mediated_decay | Mus_musculus | 0 | 2135 |
ENSMUST00000188134 | Tardbp-024 | nonsense_mediated_decay | Mus_musculus | 0 | 1766 |
ENSMUST00000165113 | Tardbp-202 | protein_coding | Mus_musculus | 0 | 1339 |
ENSMUST00000189048 | Tardbp-012 | protein_coding | Mus_musculus | 0 | 1332 |
ENSMUST00000105699 | Tardbp-006 | protein_coding | Mus_musculus | 0 | 1282 |
ENSMUST00000172073 | Tardbp-203 | protein_coding | Mus_musculus | 0 | 1256 |
ENSMUST00000095719 | Tardbp-007 | protein_coding | Mus_musculus | 0 | 1249 |
ENSMUST00000105702 | Tardbp-201 | protein_coding | Mus_musculus | 0 | 1123 |
ENSMUST00000084125 | Tardbp-001 | protein_coding | Mus_musculus | 0 | 1123 |
ENSMUST00000105700 | Tardbp-003 | protein_coding | Mus_musculus | 0 | 1116 |
ENSMUST00000191450 | Tardbp-009 | nonsense_mediated_decay | Mus_musculus | 0 | 1109 |
ENSMUST00000190552 | Tardbp-017 | nonsense_mediated_decay | Mus_musculus | 0 | 1003 |
ENSMUST00000117876 | Gm13886-001 | processed_pseudogene | Mus_musculus | 0 | 878 |
ENSMUST00000185824 | Tardbp-016 | protein_coding | Mus_musculus | 0 | 809 |
ENSMUST00000186947 | Tardbp-015 | protein_coding | Mus_musculus | 0 | 756 |
ENSMUST00000185673 | Tardbp-014 | protein_coding | Mus_musculus | 0 | 623 |
ENSMUST00000147391 | Tardbp-005 | nonsense_mediated_decay | Mus_musculus | 0 | 593 |
ENSMUST00000190696 | Tardbp-011 | nonsense_mediated_decay | Mus_musculus | 0 | 566 |
ENSMUST00000140897 | Tardbp-004 | nonsense_mediated_decay | Mus_musculus | 0 | 507 |
ENSMUST00000191378 | Tardbp-018 | nonsense_mediated_decay | Mus_musculus | 0 | 499 |
ENSMUST00000186729 | Tardbp-023 | nonsense_mediated_decay | Mus_musculus | 0 | 446 |
ENSMUST00000190287 | Tardbp-020 | nonsense_mediated_decay | Mus_musculus | 0 | 438 |
ENSMUST00000187937 | Tardbp-028 | processed_transcript | Mus_musculus | 0 | 427 |
ENSMUST00000187939 | Tardbp-019 | protein_coding | Mus_musculus | 0 | 390 |
ENSMUST00000190478 | Tardbp-013 | retained_intron | Mus_musculus | 0 | 348 |
ENSMUST00000190630 | Tardbp-021 | protein_coding | Mus_musculus | 0 | 285 |
ENSMUST00000186317 | Tardbp-027 | processed_transcript | Mus_musculus | 0 | 226 |
ENSMUST00000186711 | Tardbp-025 | protein_coding | Mus_musculus | 0 | 222 |
ENSMUST00000189041 | Tardbp-026 | processed_transcript | Mus_musculus | 0 | 222 |
ENSMUST00000188488 | Tardbp-022 | protein_coding | Mus_musculus | 6.99949e-42 | 176 |
ENSMUST00000188380 | Tardbp-029 | processed_transcript | Mus_musculus | 6e-33 | 147 |