C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | Sjogren syndrome antigen B (autoantigen La) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000474273  |
SSB-009 |
ENSG00000138385 |
9606 | + |
2:169806581-169810411  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004SC | CIL_0004SC_0001 | CGP | 2:169694488-169812064 |
| CIL_0007VY | CIL_0007VY_0001 | VISTA | 2:169713097-170314655 |
| CIL_0004SJ | CIL_0004SJ_0001 | CGP | 2:169791933-169824931 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000166411
|
Ssb-201 | protein_coding | Mus_musculus | 0 | 359 |
|
ENSMUST00000090852
|
Ssb-001 | protein_coding | Mus_musculus | 0 | 359 |
|
ENSMUST00000132603
|
Ssb-005 | protein_coding | Mus_musculus | 0 | 248 |
|
ENSMUST00000132186
|
Ssb-002 | nonsense_mediated_decay | Mus_musculus | 0 | 248 |
