C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptotagmin-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475199 SYTL1-005 ENSG00000142765 9606 + 1:27351472-27353930 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyMuscleOvaryTestisENST00000475199
Transcript ID Adipose Brain Colon Heart Kidney Muscle Ovary Testis
ENST00000475199 0.115±0.00 0.068±0.05 0.200±0.04 0.148±0.00 0.241±0.00 0.032±0.00 2.566±0.00 0.521±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WN CIL_0008WN_0001 VISTA 1:27203963-27805666

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030674 Sytl1-001 protein_coding Mus_musculus 0 440
ENSMUST00000105908 Sytl1-004 protein_coding Mus_musculus 0 440
ENSMUST00000142039 Sytl1-002 processed_transcript Mus_musculus 0 436
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000000005 68

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