C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynamin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475805 DNM1-007 ENSG00000106976 9606 + 9:128203379-128254162 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyOvaryENST00000475805
Transcript ID Breast Colon Kidney Ovary
ENST00000475805 0.377±0.00 1.806±0.00 0.081±0.00 0.256±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LU CIL_0002LU_0002 CGP 9:128160260-128204383
CIL_0002LR CIL_0002LR_0003 CGP 9:128166064-128255248
CIL_0002LS CIL_0002LS_0002 CGP 9:128203379-128275995

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005874 IEA microtubule
GO:0006184 IEA GTP catabolic process
GO:0006897 TAS endocytosis
GO:0006898 IMP receptor-mediated endocytosis
GO:0007032 IMP endosome organization
GO:0019901 ISS protein kinase binding
GO:0042802 IPI identical protein binding
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078352 Dnm1-003 protein_coding Mus_musculus 0 3736
ENSMUST00000113350 Dnm1-004 protein_coding Mus_musculus 0 3576
ENSMUST00000113352 Dnm1-002 protein_coding Mus_musculus 0 3568
ENSMUST00000139624 Dnm1-006 nonsense_mediated_decay Mus_musculus 0 3520
ENSMUST00000113365 Dnm1-001 protein_coding Mus_musculus 0 3513
ENSMUST00000091089 Dnm1-005 protein_coding Mus_musculus 0 3441
ENSDART00000147972 dnm1a-001 protein_coding Danio_rerio 0 1814
ENSDART00000026535 dnm1a-201 protein_coding Danio_rerio 0 1768
ENSMUST00000072362 Dnm2-004 protein_coding Mus_musculus 0 1570
ENSMUST00000173397 Dnm2-003 protein_coding Mus_musculus 0 1570
ENSMUST00000165766 Dnm2-001 protein_coding Mus_musculus 0 1537
ENSMUST00000172482 Dnm2-008 protein_coding Mus_musculus 0 1533
ENSDART00000134261 dnm1b-001 protein_coding Danio_rerio 0 1528
ENSMUST00000115404 Dnm2-201 protein_coding Mus_musculus 0 1520
ENSMUST00000091087 Dnm2-005 protein_coding Mus_musculus 0 1504
ENSDART00000097330 dnm1b-201 protein_coding Danio_rerio 0 1489
ENSMUST00000174050 Dnm2-002 protein_coding Mus_musculus 0 1328
ENSMUST00000129156 Dnm1-013 nonsense_mediated_decay Mus_musculus 0 1327
ENSMUST00000156866 Dnm1-008 processed_transcript Mus_musculus 0 1158
ENSDART00000024031 dnm2a-001 protein_coding Danio_rerio 0 1090
ENSMUST00000086074 Dnm3-001 protein_coding Mus_musculus 0 1046
ENSMUST00000070330 Dnm3-006 protein_coding Mus_musculus 0 924
ENSDART00000152641 dnm3-001 protein_coding Danio_rerio 0 822
ENSDART00000047039 dnm3-201 protein_coding Danio_rerio 0 819
ENSMUST00000139291 Dnm1-010 protein_coding Mus_musculus 0 739
ENSMUST00000172763 Dnm2-006 retained_intron Mus_musculus 0 636
ENSMUST00000141633 Dnm1-009 retained_intron Mus_musculus 0 558
ENSMUST00000139238 Dnm1-007 nonsense_mediated_decay Mus_musculus 0 544
ENSMUST00000173299 Dnm2-011 retained_intron Mus_musculus 0 472
ENSMUST00000161155 Dnm3-002 retained_intron Mus_musculus 0 466
ENSMUST00000155269 Dnm1-012 protein_coding Mus_musculus 0 448
ENSDART00000140280 dnm1b-002 processed_transcript Danio_rerio 0 257
ENSMUST00000145885 Dnm1-011 retained_intron Mus_musculus 0 235

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