C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppressor of Ty 20 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475892 SUPT20H-021 ENSG00000102710 9606 - 13:37009493-37059649 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonLungOvaryPlacentaTestisENST00000475892
Transcript ID Bladder Colon Lung Ovary Placenta Testis
ENST00000475892 2.105±0.00 2.324±0.65 2.832±0.00 5.650±1.21 3.442±0.71 12.124±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PE CIL_0000PE_0002 CGP 13:36949775-37009613
CIL_0006CQ CIL_0006CQ_0002 CGP 13:36998816-37059713

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000124 IEA SAGA complex
GO:0003712 IEA transcription cofactor activity
GO:0005515 IPI protein binding
GO:0006325 TAS chromatin organization
GO:0006914 IEA autophagy
GO:0007369 IEA gastrulation
GO:0070461 IDA SAGA-type complex
GO:2001141 IEA regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170552 Supt20-201 protein_coding Mus_musculus 0 1845
ENSMUST00000029315 Supt20-202 protein_coding Mus_musculus 0 617

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