C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 179, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475900 FAM179A-002 ENSG00000189350 9606 + 2:29033431-29052230 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000475900
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000475900 0.082±0.00 0.155±0.00 0.135±0.00 0.061±0.02 0.031±0.00 0.113±0.00 0.072±0.00 0.011±0.00 0.094±0.00 0.062±0.00 0.069±0.00 0.021±0.00 0.101±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013N CIL_00013N_0001 CGP 2:28894643-29061373
CIL_00013O CIL_00013O_0001 CGP 2:28956611-29074261

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144479 Fam179a-001 protein_coding Mus_musculus 0 529
ENSMUST00000129072 Fam179a-003 retained_intron Mus_musculus 0 448
ENSMUST00000097284 Fam179a-201 protein_coding Mus_musculus 0 425
ENSMUST00000153445 Fam179a-002 protein_coding Mus_musculus 0 425
ENSMUST00000146544 Golga2-011 processed_transcript Mus_musculus 0.00001 58

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