C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: distal-less homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475989 DLX1-003 ENSG00000144355 9606 + 2:172086267-172089312 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartLiverPlacentaTestisENST00000475989
Transcript ID Adipose Adrenal Brain Colon Heart Liver Placenta Testis
ENST00000475989 0.045±0.00 0.010±0.00 1.231±0.78 0.230±0.16 0.037±0.00 0.054±0.00 0.030±0.00 0.034±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RB CIL_0007RB_0001 VISTA 2:171663732-172264836
CIL_0008A7 CIL_0008A7_0001 VISTA 2:171663843-172264792
CIL_0007RB CIL_0007RB_0002 VISTA 2:171664837-172267307
CIL_0008C9 CIL_0008C9_0001 VISTA 2:171771791-172373521
CIL_0009AY CIL_0009AY_0001 VISTA 2:171783051-172384518
CIL_0008AZ CIL_0008AZ_0001 VISTA 2:171791151-172392324
CIL_0008B0 CIL_0008B0_0001 VISTA 2:171792917-172394318
CIL_0004K6 CIL_0004K6_0001 CGP 2:171999583-172089677
CIL_0007JJ CIL_0007JJ_002B UCNEbase 2:172044408-172094161
CIL_00062L CIL_00062L_0002 CGP 2:172084740-172102900

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172629 Dlx1-006 retained_intron Mus_musculus 0 621
ENSMUST00000037119 Dlx1-001 protein_coding Mus_musculus 0 566
ENSMUST00000145444 Dlx1-002 nonsense_mediated_decay Mus_musculus 0 427
ENSMUST00000145088 Dlx1-003 retained_intron Mus_musculus 0 298

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