C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000476029 HNRNPA1P24-001 ENSG00000241947 9606 + 3:149999645-150000690 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartMuscleOvaryPlacentaENST00000476029
Transcript ID Brain Heart Muscle Ovary Placenta
ENST00000476029 0.024±0.00 0.033±0.00 0.011±0.00 0.018±0.00 0.018±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002R5 CIL_0002R5_0001 CGP 3:149812708-150050788
CIL_0002QZ CIL_0002QZ_0001 CGP 3:149964904-150466431

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 1009
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 959
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 634
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 628
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 586
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 562
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 320
ENSMUST00000189260 RP23-389M9.4-001 processed_pseudogene Mus_musculus 0 278

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