C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | keratin 222 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000476049  |
KRT222-001 |
ENSG00000264058 |
9606 | - |
17:40628797-40665141  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005QY | CIL_0005QY_0001 | CGP | 17:40553769-40648508 |
| CIL_0004QH | CIL_0004QH_0001 | CGP | 17:40624962-40665141 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005198 | IEA | structural molecule activity |
| GO:0005882 | IEA | intermediate filament |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000103133
|
Smarce1-001 | protein_coding | Mus_musculus | 0 | 1328 |
|
ENSMUST00000180067
|
Gm1815-201 | processed_pseudogene | Mus_musculus | 0 | 1284 |
|
ENSMUST00000178171
|
Gm8494-201 | processed_pseudogene | Mus_musculus | 0 | 1203 |
|
ENSMUST00000103132
|
Krt222-001 | protein_coding | Mus_musculus | 0 | 1016 |
|
ENSMUST00000038214
|
Krt222-002 | protein_coding | Mus_musculus | 0 | 839 |
|
ENSMUST00000154622
|
Krt222-003 | processed_transcript | Mus_musculus | 0 | 675 |
|
ENSMUST00000156160
|
Smarce1-006 | processed_transcript | Mus_musculus | 0 | 490 |
|
ENSMUST00000155062
|
Smarce1-005 | processed_transcript | Mus_musculus | 0 | 468 |
|
ENSMUST00000135040
|
Smarce1-003 | processed_transcript | Mus_musculus | 1.4013e-45 | 189 |
