C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATH1, acid trehalase-like 1 (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000476372 ATHL1-005 ENSG00000142102 9606 + 11:291560-295683 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000476372
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000476372 1.265±0.00 7.201±0.00 0.426±0.00 1.914±0.00 1.473±0.00 0.189±0.13 7.052±0.00 9.264±0.00 3.749±2.59 0.907±0.30 0.509±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002B4 CIL_0002B4_0001 CGP 11:278365-296107
CIL_0002B6 CIL_0002B6_0001 CGP 11:289135-299526

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079403 Athl1-001 protein_coding Mus_musculus 0 514
ENSMUST00000169736 Athl1-003 retained_intron Mus_musculus 0 514
ENSMUST00000164580 Athl1-006 protein_coding Mus_musculus 0 492
ENSMUST00000163094 Athl1-004 nonsense_mediated_decay Mus_musculus 0 444
ENSMUST00000164337 Athl1-002 nonsense_mediated_decay Mus_musculus 0 433

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