C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | orthodenticle homeobox 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000476383  |
OTX1-006 |
ENSG00000115507 |
9606 | + |
2:63050851-63052207  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000976 | CIL_000976_0001 | VISTA | 2:62666720-63267794 |
| CIL_0000RR | CIL_0000RR_0002 | CGP | 2:62673851-63057836 |
| CIL_00084N | CIL_00084N_0001 | VISTA | 2:62678793-63279521 |
| CIL_00090Q | CIL_00090Q_0001 | VISTA | 2:62740879-63342178 |
| CIL_00095K | CIL_00095K_0001 | VISTA | 2:62748560-63349968 |
| CIL_0007MW | CIL_0007MW_0001 | UCNEbase | 2:62787578-63424747 |
| CIL_000100 | CIL_000100_0002 | CGP | 2:63050057-63827843 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000006071
|
Otx1-001 | protein_coding | Mus_musculus | 4e-29 | 132 |
|
ENSMUST00000172395
|
Otx1-002 | retained_intron | Mus_musculus | 2e-28 | 130 |
