C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: histone deacetylase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000476391 HDAC1-002 ENSG00000116478 9606 + 1:32329480-32333635 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartOvaryENST00000476391
Transcript ID Adrenal Brain Heart Ovary
ENST00000476391 6.073±0.00 1.499±0.00 0.294±0.00 5.840±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AA CIL_0008AA_0001 VISTA 1:31744429-32345312

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079363 Gm10093-201 protein_coding Mus_musculus 0 963
ENSMUST00000102597 Hdac1-001 protein_coding Mus_musculus 0 926
ENSMUST00000116079 Gm7146-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000142984 Hdac1-005 retained_intron Mus_musculus 0 370

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