C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7a pseudogene 56
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000476420 RPL7AP56-001 ENSG00000242834 9606 + 11:37725666-37726456 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LungTestisENST00000476420
Transcript ID Lung Testis
ENST00000476420 0.018±0.00 0.017±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085365 Gm16477-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000183380 Gm17828-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000118791 Rpl7a-ps11-001 processed_pseudogene Mus_musculus 0 403
ENSMUST00000190511 RP23-58N8.1-001 processed_pseudogene Mus_musculus 0 403
ENSMUST00000102898 Rpl7a-001 protein_coding Mus_musculus 0 398
ENSMUST00000120676 Gm12712-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000094754 Rpl7a-ps8-201 protein_coding Mus_musculus 0 381
ENSMUST00000071172 RP23-58N8.4-001 processed_pseudogene Mus_musculus 0 374
ENSMUST00000190579 Rpl7a-ps10-001 processed_pseudogene Mus_musculus 0 364
ENSMUST00000096427 Gm17415-001 processed_pseudogene Mus_musculus 0 364
ENSMUST00000095218 Rpl7a-ps5-201 protein_coding Mus_musculus 0 359
ENSMUST00000090170 Rpl7a-ps3-201 protein_coding Mus_musculus 0 359
ENSMUST00000191231 RP24-217I2.2-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000162120 Gm7418-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000189720 RP23-321G17.2-001 processed_pseudogene Mus_musculus 0 348
ENSMUST00000117398 Gm8250-001 processed_pseudogene Mus_musculus 0 344
ENSMUST00000119745 Gm13864-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000171235 Gm5459-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000118638 Gm13039-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000136269 Rpl7a-002 processed_transcript Mus_musculus 0 324
ENSMUST00000104977 Gm4877-201 protein_coding Mus_musculus 0 324
ENSMUST00000117240 Gm11989-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000071565 Gm4978-201 protein_coding Mus_musculus 0 315
ENSMUST00000161633 Gm5766-001 transcribed_processed_pseudogene Mus_musculus 0 309
ENSMUST00000160520 Gm5766-002 processed_transcript Mus_musculus 0 309
ENSMUST00000121575 Gm12630-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000119629 Gm11979-001 processed_pseudogene Mus_musculus 0 305
ENSMUST00000171395 Gm8425-001 processed_pseudogene Mus_musculus 0 296
ENSMUST00000116081 Gm14853-001 processed_pseudogene Mus_musculus 0 296
ENSMUST00000118973 Gm15617-001 processed_pseudogene Mus_musculus 0 287
ENSMUST00000121823 Gm5257-001 processed_pseudogene Mus_musculus 0 285
ENSMUST00000122273 Gm12269-001 processed_pseudogene Mus_musculus 0 276
ENSMUST00000137376 Rpl7a-004 processed_transcript Mus_musculus 0 276
ENSMUST00000139800 Gm5353-001 processed_pseudogene Mus_musculus 0 265
ENSMUST00000118766 Gm16198-001 processed_pseudogene Mus_musculus 0 255
ENSMUST00000185009 Gm14214-001 translated_processed_pseudogene Mus_musculus 0 254
ENSMUST00000184654 Gm14214-002 protein_coding Mus_musculus 0 248
ENSMUST00000117439 Gm12385-001 processed_pseudogene Mus_musculus 0 246
ENSMUST00000129972 Gm16304-001 processed_pseudogene Mus_musculus 0 241
ENSMUST00000118838 Gm11362-001 processed_pseudogene Mus_musculus 0 237
ENSMUST00000143678 Rpl7a-003 processed_transcript Mus_musculus 0 235
ENSMUST00000121538 Gm14156-001 processed_pseudogene Mus_musculus 0 233
ENSMUST00000165944 RP24-170M24.1-001 processed_pseudogene Mus_musculus 0 231
ENSMUST00000120981 Gm12593-001 processed_pseudogene Mus_musculus 0 228
ENSMUST00000118615 Gm13183-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000117118 Rpl7a-ps9-001 processed_pseudogene Mus_musculus 0 211
ENSMUST00000188170 RP23-248N10.1-001 processed_pseudogene Mus_musculus 2.00386e-43 180
ENSMUST00000160362 Gm2976-001 processed_pseudogene Mus_musculus 4.00001e-41 172
ENSMUST00000119253 Gm13975-001 processed_pseudogene Mus_musculus 5e-40 169
ENSMUST00000172650 Gm7393-001 processed_pseudogene Mus_musculus 5e-25 119
ENSMUST00000119680 Gm15702-001 processed_pseudogene Mus_musculus 3e-17 94
ENSMUST00000129673 Rpl7a-005 processed_transcript Mus_musculus 0.000000000003 77
ENSMUST00000118404 Gm12713-001 processed_pseudogene Mus_musculus 0.0000003 60

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