C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: S-antigen; retina and pineal gland (arrestin)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000476500 SAG-003 ENSG00000130561 9606 + 2:233307816-233347054 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000476500
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000476500 0.040±0.00 0.159±0.00 0.052±0.00 0.066±0.04 0.019±0.00 0.020±0.00 0.094±0.00 0.064±0.00 0.024±0.00 0.007±0.00 0.012±0.00 0.007±0.00 0.133±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004L2 CIL_0004L2_0002 CGP 2:233210051-233347055
CIL_0003RA CIL_0003RA_0001 CGP 2:233307816-233472104

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000177757 Sag-201 protein_coding Mus_musculus 2e-37 163
ENSMUST00000136708 Sag-007 processed_transcript Mus_musculus 2e-37 163
ENSMUST00000144334 Sag-008 processed_transcript Mus_musculus 2e-37 163
ENSMUST00000077772 Sag-001 protein_coding Mus_musculus 2e-37 163
ENSMUST00000128761 Sag-003 retained_intron Mus_musculus 2e-37 163
ENSMUST00000155393 Sag-004 retained_intron Mus_musculus 2e-37 163
ENSMUST00000130886 Sag-002 retained_intron Mus_musculus 2e-37 163
ENSMUST00000156381 Sag-006 retained_intron Mus_musculus 0.00000000009 75
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000000004 69
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000009 58

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