C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GTP binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000476510 GTPBP2-001 ENSG00000172432 9606 - 6:43620490-43627017 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000476510
Transcript ID Ovary Placenta Testis
ENST00000476510 7.705±0.10 4.237±1.04 8.451±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YI CIL_0008YI_0001 VISTA 6:43493027-44094540

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024748 Gtpbp2-001 protein_coding Mus_musculus 0 2815
ENSMUST00000169383 Gtpbp2-002 nonsense_mediated_decay Mus_musculus 0 2815
ENSMUST00000172170 Gtpbp2-004 protein_coding Mus_musculus 0 2167
ENSMUST00000169955 Gtpbp2-009 processed_transcript Mus_musculus 0 1099
ENSMUST00000169778 Gtpbp2-011 retained_intron Mus_musculus 0 1044
ENSMUST00000167404 Gtpbp2-008 retained_intron Mus_musculus 0 553
ENSMUST00000167681 Gtpbp2-014 retained_intron Mus_musculus 0 551
ENSMUST00000166663 Gtpbp2-017 retained_intron Mus_musculus 0 545
ENSMUST00000169918 Gtpbp2-010 retained_intron Mus_musculus 0 479
ENSMUST00000169798 Gtpbp2-016 retained_intron Mus_musculus 0 459
ENSMUST00000166701 Gtpbp2-015 protein_coding Mus_musculus 0 444
ENSMUST00000166252 Gtpbp2-013 nonsense_mediated_decay Mus_musculus 0 436
ENSMUST00000163941 Gtpbp2-012 retained_intron Mus_musculus 0 411
ENSMUST00000171901 Gtpbp2-007 processed_transcript Mus_musculus 0 372
ENSMUST00000166563 Gtpbp2-006 protein_coding Mus_musculus 2.00386e-43 182

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