C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | TIA1 cytotoxic granule-associated RNA binding protein | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000477044  |
TIA1-008 |
ENSG00000116001 |
9606 | - |
2:70224424-70248611  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00089T | CIL_00089T_0001 | VISTA | 2:69833131-70434482 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0003676 | IEA | nucleic acid binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000139928
|
Tia1-014 | processed_transcript | Mus_musculus | 0 | 763 |
|
ENSMUST00000095753
|
Tia1-001 | protein_coding | Mus_musculus | 0 | 582 |
|
ENSMUST00000095754
|
Tia1-010 | protein_coding | Mus_musculus | 0 | 582 |
|
ENSMUST00000143718
|
Tia1-013 | processed_transcript | Mus_musculus | 0 | 564 |
|
ENSMUST00000113712
|
Tia1-005 | nonsense_mediated_decay | Mus_musculus | 0 | 564 |
|
ENSMUST00000095752
|
Tia1-003 | protein_coding | Mus_musculus | 0 | 521 |
|
ENSMUST00000148728
|
Tia1-012 | processed_transcript | Mus_musculus | 0 | 521 |
|
ENSMUST00000130967
|
Tia1-002 | protein_coding | Mus_musculus | 0 | 520 |
|
ENSMUST00000154438
|
Tia1-022 | processed_transcript | Mus_musculus | 0 | 514 |
|
ENSMUST00000134142
|
Tia1-008 | retained_intron | Mus_musculus | 0 | 505 |
|
ENSMUST00000156762
|
Tia1-017 | processed_transcript | Mus_musculus | 0 | 503 |
|
ENSMUST00000113708
|
Tia1-009 | protein_coding | Mus_musculus | 0 | 496 |
|
ENSMUST00000113713
|
Tia1-007 | protein_coding | Mus_musculus | 0 | 475 |
|
ENSMUST00000124683
|
Tia1-024 | processed_transcript | Mus_musculus | 0 | 446 |
|
ENSMUST00000147104
|
Tia1-016 | processed_transcript | Mus_musculus | 0 | 329 |
|
ENSMUST00000136387
|
Tia1-011 | retained_intron | Mus_musculus | 0 | 322 |
|
ENSMUST00000141960
|
Tia1-006 | retained_intron | Mus_musculus | 0 | 315 |
|
ENSMUST00000149270
|
Tia1-023 | retained_intron | Mus_musculus | 0 | 272 |
|
ENSMUST00000126404
|
Tia1-019 | processed_transcript | Mus_musculus | 0 | 233 |
|
ENSMUST00000154983
|
Tia1-004 | processed_transcript | Mus_musculus | 5e-40 | 169 |
|
ENSMUST00000123002
|
Tia1-018 | processed_transcript | Mus_musculus | 1e-26 | 124 |
