C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L5 pseudogene 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477071 RPL5P12-001 ENSG00000242697 9606 + 4:98025390-98026240 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000477071
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000477071 0.104±0.00 0.013±0.00 0.025±0.00 0.120±0.00 0.012±0.00 0.039±0.00 0.035±0.00 0.080±0.02 0.035±0.00 0.033±0.00 0.059±0.00 0.045±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071523 Gm15500-001 transcribed_processed_pseudogene Mus_musculus 0 946
ENSMUST00000071641 Gm15500-002 processed_transcript Mus_musculus 0 946
ENSMUST00000082223 Rpl5-001 protein_coding Mus_musculus 0 946
ENSMUST00000121367 Rpl5-ps1-001 processed_pseudogene Mus_musculus 0 902
ENSMUST00000119057 Rpl5-ps2-001 processed_pseudogene Mus_musculus 0 896
ENSMUST00000153590 Rpl5-002 protein_coding Mus_musculus 0 713
ENSMUST00000123183 Rpl5-003 retained_intron Mus_musculus 0 627
ENSMUST00000169624 Gm19840-001 processed_pseudogene Mus_musculus 0 566
ENSMUST00000118662 Gm15616-001 processed_pseudogene Mus_musculus 0 403
ENSMUST00000118025 Gm15766-001 processed_pseudogene Mus_musculus 0 372
ENSMUST00000129944 Rpl5-004 retained_intron Mus_musculus 0 283

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