C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | cyclin L1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000477127  |
CCNL1-009 |
ENSG00000163660 |
9606 | - |
3:157149287-157160178  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00028X | CIL_00028X_0001 | CGP | 3:156825481-157160760 |
| CIL_00081H | CIL_00081H_0001 | VISTA | 3:156827989-157431369 |
| CIL_00028W | CIL_00028W_0001 | CGP | 3:157146508-157533619 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000079 | IEA | regulation of cyclin-dependent protein serine/threonine kinase activity |
| GO:0005634 | IDA | nucleus |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0006396 | IEA | RNA processing |
| GO:0019901 | IEA | protein kinase binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000129002
|
Ccnl1-002 | nonsense_mediated_decay | Mus_musculus | 0 | 1993 |
|
ENSMUST00000029416
|
Ccnl1-001 | protein_coding | Mus_musculus | 0 | 1112 |
|
ENSMUST00000135719
|
Ccnl1-003 | nonsense_mediated_decay | Mus_musculus | 0 | 1110 |
|
ENSMUST00000144810
|
Ccnl1-009 | nonsense_mediated_decay | Mus_musculus | 0 | 857 |
|
ENSMUST00000142153
|
Ccnl1-005 | retained_intron | Mus_musculus | 0 | 789 |
|
ENSMUST00000122919
|
Ccnl1-004 | retained_intron | Mus_musculus | 0 | 787 |
|
ENSMUST00000154585
|
Ccnl1-007 | nonsense_mediated_decay | Mus_musculus | 0 | 787 |
|
ENSMUST00000149160
|
Ccnl1-006 | retained_intron | Mus_musculus | 0 | 625 |
|
ENSMUST00000148623
|
Ccnl1-008 | retained_intron | Mus_musculus | 0 | 420 |
|
ENSMUST00000150304
|
Ccnl1-013 | retained_intron | Mus_musculus | 0 | 398 |
|
ENSMUST00000132998
|
Ccnl1-012 | retained_intron | Mus_musculus | 0 | 327 |
|
ENSMUST00000145186
|
Ccnl1-010 | nonsense_mediated_decay | Mus_musculus | 0 | 326 |
|
ENSMUST00000146284
|
Ccnl1-011 | retained_intron | Mus_musculus | 0 | 217 |
|
ENSMUST00000149729
|
Ccnl1-014 | retained_intron | Mus_musculus | 1e-38 | 165 |
