C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UTP6, small subunit (SSU) processome component, homolog (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477128 UTP6-004 ENSG00000108651 9606 - 17:31863174-31888221 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryENST00000477128
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000477128 5.152±0.00 1.471±0.47 1.315±0.00 2.768±1.05 0.756±0.00 2.474±0.00 1.518±0.00 1.431±0.30 4.711±0.00 4.472±1.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VR CIL_0000VR_0001 CGP 17:31860899-32001045

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043152 Utp6-001 protein_coding Mus_musculus 0 1230
ENSMUST00000108241 Utp6-002 protein_coding Mus_musculus 0 1230
ENSMUST00000165682 Rasl12-202 protein_coding Mus_musculus 0.0000000000002 82
ENSMUST00000146537 Abl1-002 processed_transcript Mus_musculus 0.00000000003 75
ENSMUST00000120488 Klhl22-001 protein_coding Mus_musculus 0.00000000003 75
ENSMUST00000155115 Adam17-004 retained_intron Mus_musculus 0.000000002 69
ENSMUST00000123200 Paqr6-004 retained_intron Mus_musculus 0.000000002 69
ENSMUST00000074912 2010012O05Rik-201 protein_coding Mus_musculus 0.00004 55

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