C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | suppressor of cancer cell invasion | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000477186  |
SCAI-004 |
ENSG00000173611 |
9606 | - |
9:124952788-125143487  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002C7 | CIL_0002C7_0002 | CGP | 9:124862130-124948492 |
| CIL_00075F | CIL_00075F_0001 | CGP | 9:124878357-125143506 |
| CIL_00075C | CIL_00075C_0001 | CGP | 9:124942608-125189939 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003714 | IEA | transcription corepressor activity |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:2001141 | IEA | regulation of RNA biosynthetic process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000038874
|
Scai-001 | protein_coding | Mus_musculus | 0 | 1989 |
|
ENSMUST00000147433
|
Scai-002 | nonsense_mediated_decay | Mus_musculus | 0 | 1751 |
|
ENSMUST00000157038
|
Scai-003 | retained_intron | Mus_musculus | 0 | 1413 |
|
ENSMUST00000131225
|
Scai-005 | retained_intron | Mus_musculus | 0 | 462 |
|
ENSMUST00000142872
|
Scai-004 | protein_coding | Mus_musculus | 0 | 243 |
