C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: early B-cell factor 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477287 EBF4-003 ENSG00000088881 9606 + 20:2755088-2760101 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000477287
Transcript ID Adrenal Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000477287 1.037±0.00 2.261±0.00 0.281±0.00 0.882±0.75 0.980±0.00 2.531±0.00 5.847±1.27 1.078±0.10 0.991±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SG CIL_0007SG_0001 VISTA 20:2438562-3039143
CIL_0000FY CIL_0000FY_0001 CGP 20:2658395-2760108
CIL_0000FX CIL_0000FX_0001 CGP 20:2692878-2800637

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110287 Ebf4-006 protein_coding Mus_musculus 0 466
ENSMUST00000110286 Ebf4-001 protein_coding Mus_musculus 0 464
ENSMUST00000110288 Ebf4-002 protein_coding Mus_musculus 0 464
ENSMUST00000126740 Ebf4-004 nonsense_mediated_decay Mus_musculus 0 298
ENSMUST00000134728 Ebf4-003 retained_intron Mus_musculus 0 298

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