C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Na+/K+ transporting, alpha 4 polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477338 ATP1A4-004 ENSG00000132681 9606 + 1:160151586-160186977 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverENST00000477338
Transcript ID Brain Heart Liver
ENST00000477338 0.054±0.00 0.028±0.00 0.057±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005524 IEA ATP binding
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0046872 IEA metal ion binding
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111243 Atp1a4-001 protein_coding Mus_musculus 0 2152
ENSMUST00000097464 Atp1a2-004 protein_coding Mus_musculus 0 1495
ENSMUST00000131751 Atp1a2-003 retained_intron Mus_musculus 0 1495
ENSMUST00000085913 Atp1a2-001 protein_coding Mus_musculus 0 1495
ENSMUST00000080882 Atp1a3-001 protein_coding Mus_musculus 0 1356
ENSMUST00000102858 Atp1a3-002 protein_coding Mus_musculus 0 1356
ENSDART00000104950 atp1a3a-001 protein_coding Danio_rerio 0 1160
ENSMUST00000137679 Atp1a2-002 protein_coding Mus_musculus 0 893
ENSMUST00000146595 Atp1a3-003 retained_intron Mus_musculus 0 736
ENSMUST00000005692 Atp4a-002 protein_coding Mus_musculus 0 302
ENSMUST00000170371 Atp4a-001 protein_coding Mus_musculus 0 217
ENSMUST00000167761 Atp4a-003 retained_intron Mus_musculus 0.00000003 66

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