C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477649 VMA21-002 ENSG00000160131 9606 + X:151396515-151405157 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000477649
Transcript ID Muscle
ENST00000477649 2.741±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DG CIL_0009DG_0001 VISTA X:150939220-151540580
CIL_0001AU CIL_0001AU_0001 CGP X:151176653-151409364

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114577 Vma21-002 protein_coding Mus_musculus 0 350
ENSMUST00000114575 Vma21-003 protein_coding Mus_musculus 0 346
ENSMUST00000114576 Vma21-001 protein_coding Mus_musculus 0 346
ENSMUST00000138979 Vma21-004 processed_transcript Mus_musculus 0 344
ENSMUST00000121259 Gm14845-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000114578 Vma21-ps-201 protein_coding Mus_musculus 0 287

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