C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein phosphatase 1, regulatory (inhibitor) subunit 2 pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000478565 PPP1R2P6-001 ENSG00000241661 9606 + 7:140292752-140293339 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastTestisENST00000478565
Transcript ID Brain Breast Testis
ENST00000478565 0.162±0.00 0.057±0.00 0.444±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZU CIL_0008ZU_0001 VISTA 7:139910788-140514447
CIL_000307 CIL_000307_0001 CGP 7:140084746-140404433

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060188 Ppp1r2-001 protein_coding Mus_musculus 0 392
ENSMUST00000112182 Ppp1r2-ps4-001 processed_pseudogene Mus_musculus 0 385
ENSMUST00000117103 Ppp1r2-ps2-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000179333 Ppp1r2-ps6-001 processed_pseudogene Mus_musculus 0 375
ENSMUST00000115233 Ppp1r2-002 protein_coding Mus_musculus 0 372
ENSMUST00000178232 Ppp1r2-ps1-201 processed_pseudogene Mus_musculus 0 370
ENSMUST00000078012 Ppp1r2-ps3-201 processed_pseudogene Mus_musculus 0 348

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