C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: major histocompatibility complex, class I, A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000478740 HLA-A-004 ENSG00000206505 9606 + CHR_HSCHR6_MHC_QBL_CTG1:29931914-29935265 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025181 H2-K1-001 protein_coding Mus_musculus 0 518
ENSMUST00000114311 H2-K1-002 retained_intron Mus_musculus 0 518
ENSMUST00000172912 H2-K1-003 protein_coding Mus_musculus 0 518
ENSMUST00000173080 H2-Bl-201 protein_coding Mus_musculus 0 455
ENSMUST00000173075 H2-K1-010 protein_coding Mus_musculus 0 420
ENSMUST00000176712 H2-M5-002 protein_coding Mus_musculus 0 416
ENSMUST00000176784 H2-M5-005 protein_coding Mus_musculus 0 414
ENSMUST00000169189 H2-M5-001 protein_coding Mus_musculus 0 414
ENSMUST00000145260 H2-M5-003 retained_intron Mus_musculus 0 414
ENSMUST00000185087 H2-Bl-005 nonsense_mediated_decay Mus_musculus 0 403
ENSMUST00000113667 H2-M5-004 protein_coding Mus_musculus 0 248
ENSMUST00000173402 Gm5682-001 unprocessed_pseudogene Mus_musculus 0 207
ENSMUST00000184502 H2-Bl-008 protein_coding Mus_musculus 5.00264e-43 180
ENSMUST00000172782 H2-K1-007 processed_transcript Mus_musculus 1.99993e-41 174

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