C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000479093 ATIC-016 ENSG00000138363 9606 + 2:215338766-215349733 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000479093
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000479093 21.997±0.00 8.002±6.73 3.799±0.00 13.075±0.00 10.847±8.25 7.844±5.52 3.483±0.00 57.150±35.53 43.771±33.47 27.363±6.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MH CIL_0005MH_0001 CGP 2:214931542-215349773
CIL_0005MI CIL_0005MI_0001 CGP 2:215311817-215436172

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027384 Atic-001 protein_coding Mus_musculus 0 736
ENSMUST00000119845 Gm5721-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000155769 Atic-004 retained_intron Mus_musculus 0 198
ENSMUST00000154855 Atic-005 retained_intron Mus_musculus 0.000000000000005 86

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