C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: WD repeat domain 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000479429 WDR4-007 ENSG00000160193 9606 - 21:42854562-42879515 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonOvaryTestisENST00000479429
Transcript ID Adipose Colon Ovary Testis
ENST00000479429 1.236±0.00 1.695±0.00 1.982±0.00 1.788±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QJ CIL_0008QJ_0001 VISTA 21:42290762-42894212
CIL_0001D2 CIL_0001D2_0002 CGP 21:42653636-42879568
CIL_0001I2 CIL_0001I2_0001 CGP 21:42843094-42913304

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172284 Wdr4-003 nonsense_mediated_decay Mus_musculus 0 636
ENSMUST00000171171 Wdr4-001 protein_coding Mus_musculus 0 429
ENSMUST00000171291 Wdr4-007 protein_coding Mus_musculus 0 274
ENSMUST00000166626 Wdr4-006 protein_coding Mus_musculus 0 217
ENSMUST00000167419 Wdr4-005 protein_coding Mus_musculus 0 217
ENSMUST00000170176 Wdr4-002 nonsense_mediated_decay Mus_musculus 0 217
ENSMUST00000169224 Wdr4-009 retained_intron Mus_musculus 4e-36 156

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