C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP6V1G2-DDX39B readthrough (NMD candidate)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000480131 ATP6V1G2-DDX39B-002 ENSG00000254870 9606 - 6:31540414-31546608 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0015992 IEA proton transport
GO:0016471 IEA vacuolar proton-transporting V-type ATPase complex
GO:0016820 IEA hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000142415 Atp6v1g2-006 retained_intron Mus_musculus 0 248
ENSMUST00000068261 Atp6v1g2-001 protein_coding Mus_musculus 0 248
ENSMUST00000174757 Ddx39b-002 protein_coding Mus_musculus 5.00264e-43 178
ENSMUST00000172549 Ddx39b-004 protein_coding Mus_musculus 7e-37 158
ENSMUST00000173731 Ddx39b-006 protein_coding Mus_musculus 7e-37 158
ENSMUST00000174164 Ddx39b-005 retained_intron Mus_musculus 7e-37 158
ENSMUST00000068056 Ddx39b-001 protein_coding Mus_musculus 7e-37 158

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