C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 90 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000480493 ZNF90P1-001 ENSG00000241738 9606 + 3:101357292-101359242 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLungMuscleOvaryTestisENST00000480493
Transcript ID Adrenal Brain Breast Colon Heart Lung Muscle Ovary Testis
ENST00000480493 0.064±0.00 0.047±0.00 0.188±0.00 0.101±0.10 0.042±0.00 0.058±0.00 0.037±0.03 0.109±0.06 0.037±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000012725 Zfp273-002 protein_coding Mus_musculus 0 252
ENSMUST00000181391 Zfp273-001 protein_coding Mus_musculus 0 252
ENSMUST00000180507 Zfp493-003 retained_intron Mus_musculus 0 198
ENSMUST00000164936 Zfp493-001 protein_coding Mus_musculus 0 198
ENSMUST00000091481 Zfp72-201 protein_coding Mus_musculus 0 196
ENSMUST00000091520 Zfp85-201 protein_coding Mus_musculus 3e-31 141
ENSMUST00000144183 Zfp85-001 protein_coding Mus_musculus 3e-31 141
ENSMUST00000190566 Zfp708-002 protein_coding Mus_musculus 1e-24 119
ENSMUST00000109742 Zfp708-001 protein_coding Mus_musculus 1e-24 119
ENSMUST00000109743 RSLCAN18-202 protein_coding Mus_musculus 1e-24 119
ENSMUST00000186303 RSLCAN18-001 nonsense_mediated_decay Mus_musculus 1e-24 119
ENSMUST00000185856 RSLCAN18-004 processed_transcript Mus_musculus 1e-24 119
ENSMUST00000076123 Zfp58-001 protein_coding Mus_musculus 0.0000002 62
ENSMUST00000171518 Zfp58-002 protein_coding Mus_musculus 0.0000002 62
ENSDART00000075281 zgc:113372-201 protein_coding Danio_rerio 0.00001 57
ENSDART00000123641 zgc:113372-001 protein_coding Danio_rerio 0.00001 57

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