C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: small nuclear ribonucleoprotein 200kDa (U5)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000480615 SNRNP200-003 ENSG00000144028 9606 - 2:96284815-96289855 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000480615
Transcript ID Ovary Placenta Testis
ENST00000480615 40.633±0.00 18.415±0.00 21.247±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103220 Snrnp200-001 protein_coding Mus_musculus 0 1736
ENSDART00000109885 snrnp200-001 protein_coding Danio_rerio 0 992
ENSDART00000143385 snrnp200-002 processed_transcript Danio_rerio 0 353
ENSMUST00000156289 Rgs20-006 retained_intron Mus_musculus 0.000002 58
ENSMUST00000105845 Ephb2-001 protein_coding Mus_musculus 0.000002 58

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