C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000480875 RP11-10G12.1-001 ENSG00000244538 9606 + 4:22594196-22594450 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000480875
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000480875 0.683±0.00 0.216±0.00 0.233±0.00 0.149±0.00 0.272±0.00 0.259±0.00 0.145±0.00 0.063±0.00 0.265±0.00 0.370±0.00 1.281±1.08 0.307±0.00 0.195±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002OU CIL_0002OU_0001 CGP 4:22345071-23904089

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053150 Rps27rt-001 protein_coding Mus_musculus 0 374
ENSMUST00000170122 Rps27-201 protein_coding Mus_musculus 0 374
ENSMUST00000118062 Gm15531-001 processed_pseudogene Mus_musculus 0 327
ENSMUST00000173599 Gm19246-001 processed_pseudogene Mus_musculus 0 307
ENSMUST00000118179 Rps27-ps1-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000119164 Gm11572-001 processed_pseudogene Mus_musculus 9.99967e-42 172

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