C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: major histocompatibility complex, class I, F
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000482257 HLA-F-009 ENSG00000204642 9606 + 6:29723434-29725087 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryPlacentaENST00000482257
Transcript ID Liver Ovary Placenta
ENST00000482257 9.007±0.51 28.527±14.05 12.589±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000420 CIL_000420_0003 CGP 6:29722775-29831125

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102678 H2-T23-001 protein_coding Mus_musculus 9.80909e-45 183
ENSMUST00000174839 H2-T23-002 retained_intron Mus_musculus 4.06377e-44 182
ENSMUST00000174471 H2-T23-005 retained_intron Mus_musculus 3e-31 139
ENSMUST00000174161 H2-T23-003 retained_intron Mus_musculus 3e-31 139

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