C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear VCP-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000482491 NVL-201 ENSG00000143748 9606 - 1:224227337-224330189 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastKidneyLiverLungOvaryPlacentaENST00000482491
Transcript ID Adipose Brain Breast Kidney Liver Lung Ovary Placenta
ENST00000482491 0.522±0.00 0.816±0.00 0.608±0.00 0.233±0.00 0.399±0.00 0.540±0.00 1.803±0.59 1.661±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000BX CIL_0000BX_0002 CGP 1:224175756-224330387
CIL_0008IP CIL_0008IP_0001 VISTA 1:224201914-224806293
CIL_0005S3 CIL_0005S3_0001 CGP 1:224227334-224379459

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0009378 IEA four-way junction helicase activity
GO:0016020 IDA membrane
GO:0016301 IEA kinase activity
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027797 Nvl-201 protein_coding Mus_musculus 0 1936

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