C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: autophagy related 4B, cysteine peptidase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000482507 ATG4B-004 ENSG00000168397 9606 + 2:241637698-241672631 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalKidneyLiverLungOvaryTestisENST00000482507
Transcript ID Adrenal Kidney Liver Lung Ovary Testis
ENST00000482507 9.252±0.00 6.630±0.00 3.415±0.00 6.914±0.00 24.089±11.44 20.382±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004U9 CIL_0004U9_0002 CGP 2:241558721-241637449
CIL_0003ST CIL_0003ST_0001 CGP 2:241584405-241673857
CIL_0004UA CIL_0004UA_0002 CGP 2:241637213-241686991

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027502 Atg4b-001 protein_coding Mus_musculus 0 1050
ENSMUST00000135762 Atg4b-002 retained_intron Mus_musculus 0 702
ENSMUST00000149436 Atg4b-003 protein_coding Mus_musculus 0 327
ENSMUST00000187824 Atg4b-005 protein_coding Mus_musculus 0 231
ENSMUST00000186124 Atg4b-009 retained_intron Mus_musculus 2e-38 165
ENSMUST00000185754 Atg4b-008 retained_intron Mus_musculus 3e-27 128
ENSMUST00000186811 Atg4b-011 nonsense_mediated_decay Mus_musculus 3e-27 128

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