C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000482544 TAF1-018 ENSG00000147133 9606 + X:71458273-71466504 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000482544
Transcript ID Muscle
ENST00000482544 3.380±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066O CIL_00066O_0001 CGP X:71301734-71532374
CIL_0000TR CIL_0000TR_0001 CGP X:71366239-71575897

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000143908 Taf1-005 nonsense_mediated_decay Mus_musculus 0 630
ENSMUST00000101341 Taf1-201 protein_coding Mus_musculus 0 486
ENSMUST00000140470 Taf1-004 processed_transcript Mus_musculus 0 486
ENSMUST00000129487 Taf1-003 retained_intron Mus_musculus 0 486
ENSMUST00000118878 Taf1-001 protein_coding Mus_musculus 0 486

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