C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000482594 RP11-134G8.6-001 ENSG00000242150 9606 + 1:201520056-201520549 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainKidneyPlacentaENST00000482594
Transcript ID Bladder Brain Kidney Placenta
ENST00000482594 0.318±0.00 0.818±0.00 0.974±0.00 0.582±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LW CIL_0001LW_0002 CGP 1:201483530-201826969

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178774 Rps10-201 protein_coding Mus_musculus 0 564
ENSMUST00000114881 Rps10-003 protein_coding Mus_musculus 0 564
ENSMUST00000114882 Rps10-001 protein_coding Mus_musculus 0 564
ENSMUST00000127484 Rps10-ps2-001 processed_pseudogene Mus_musculus 0 547
ENSMUST00000155071 Rps10-006 processed_transcript Mus_musculus 0 516
ENSMUST00000145226 Rps10-004 retained_intron Mus_musculus 0 470
ENSMUST00000025052 Rps10-002 protein_coding Mus_musculus 0 470
ENSMUST00000152982 Rps10-007 processed_transcript Mus_musculus 0 331

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