C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: runt-related transcription factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000483243 RUNX2-005 ENSG00000124813 9606 + 6:45328323-45372055 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000483243
Transcript ID Testis
ENST00000483243 0.928±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028U CIL_00028U_0002 CGP 6:44387525-45377953
CIL_00028T CIL_00028T_0002 CGP 6:44809317-45664349
CIL_0007Z9 CIL_0007Z9_0001 VISTA 6:45132802-45734411
CIL_00082L CIL_00082L_0001 VISTA 6:45237622-45839555
CIL_00008A CIL_00008A_0003 CGP 6:45328157-46080395

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161489 Runx2-005 retained_intron Mus_musculus 0 457
ENSMUST00000113571 Runx2-201 protein_coding Mus_musculus 0 453
ENSMUST00000113568 Runx2-004 nonsense_mediated_decay Mus_musculus 0 217
ENSMUST00000160673 Runx2-001 protein_coding Mus_musculus 0 217
ENSMUST00000159943 Runx2-003 protein_coding Mus_musculus 0 196

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