C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDK5 regulatory subunit associated protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000483412 CDK5RAP2-015 ENSG00000136861 9606 - 9:120406146-120536437 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLiverLungOvaryENST00000483412
Transcript ID Bladder Brain Heart Kidney Liver Lung Ovary
ENST00000483412 0.439±0.00 0.411±0.00 0.317±0.00 0.742±0.00 0.727±0.00 0.887±0.00 0.877±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FK CIL_0004FK_0001 CGP 9:119153458-120580170
CIL_0004FL CIL_0004FL_0001 CGP 9:120388869-120714470

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076541 Cdk5rap2-003 nonsense_mediated_decay Mus_musculus 0 1382
ENSMUST00000144099 Cdk5rap2-001 protein_coding Mus_musculus 0 1382
ENSMUST00000138561 Cdk5rap2-006 protein_coding Mus_musculus 0 464
ENSMUST00000140108 Cdk5rap2-002 protein_coding Mus_musculus 0 209

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