C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5',3'-nucleotidase, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000483704 NT5M-003 ENSG00000205309 9606 + 17:17303678-17347663 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartKidneyLiverLungOvaryPlacentaTestisENST00000483704
Transcript ID Adipose Brain Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000483704 0.164±0.00 1.032±0.00 0.133±0.00 0.227±0.00 0.106±0.00 0.837±0.00 0.246±0.04 0.367±0.00 2.476±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009A0 CIL_0009A0_0001 VISTA 17:17235872-17840873
CIL_0000NX CIL_0000NX_0001 CGP 17:17246820-17347663
CIL_0000NW CIL_0000NW_0001 CGP 17:17303335-17493226

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008253 IEA 5'-nucleotidase activity
GO:0009264 IEA deoxyribonucleotide catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000137695 Nt5m-004 processed_transcript Mus_musculus 0 501
ENSMUST00000149076 Nt5m-002 processed_transcript Mus_musculus 0 497
ENSMUST00000102695 Nt5m-001 protein_coding Mus_musculus 0 496
ENSMUST00000154699 Nt5m-003 processed_transcript Mus_musculus 0 392

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